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MOTS-c vs SS-31

Both appear in mitochondrial research, but they work in opposite ways. MOTS-c is a natural 16-residue peptide encoded by mitochondrial DNA that acts as a signal from the mitochondrion to the rest of the cell. SS-31 is a synthetic four-residue peptide designed to enter mitochondria and bind cardiolipin.

Mitochondria-encoded signalling peptide

Choose MOTS-c if

  • ✓ Your question is about mitochondria-to-nucleus signalling
  • ✓ You are studying mitochondrial-derived peptides such as humanin
Buy MOTS-c

Mitochondria-targeted tetrapeptide

Choose SS-31 if

  • ✓ Your question is about cardiolipin and inner-membrane structure
  • ✓ You need the compound with human trial data
Buy SS-31

Side-by-side specification

CompareMOTS-c
Mitochondria-encoded signalling peptide
SS-31
Mitochondria-targeted tetrapeptide
ClassMitochondrial-derived peptideMitochondria-targeted peptide
Research areaMitochondrialMitochondrial
Receptor targetsAMPK signalling (mechanism proposed, not settled)Cardiolipin, inner mitochondrial membrane
Length16 amino acids4 amino acids (includes D-arginine and dimethyltyrosine)
Molecular mass≈ 2.17 kDa≈ 640 Da
OriginEncoded in mitochondrial DNA, produced syntheticallySynthetic
Evidence level
2/5
Mostly animal and in vitro
4/5
Late-stage human trials
Regulatory statusNot approvedApproved in the US only (accelerated approval)
Nordapep fromNot listedNot listed
Best price per mgNot listedNot listed
View MOTS-c at Nordapep →View SS-31 at Nordapep →

What separates them

The evidence is also very different. SS-31 (elamipretide) has an FDA accelerated approval for one rare condition and a mixed set of phase 3 results. MOTS-c has no human interventional trials and relies mainly on cell and mouse work.

Read the full guides for MOTS-c and SS-31, or add a third compound in the comparison tool.

Studying both?
Nordapep lists each with its own batch CoA. Its research stacks bundle common pairings.
See stacks at Nordapep

FAQ

Which is naturally made by the body?

MOTS-c. SS-31 is entirely synthetic.

Is SS-31 approved?

As elamipretide it has FDA accelerated approval for one rare condition. See its compound page.

Are MOTS-c and SS-31 approved medicines?

MOTS-c: Not approved. SS-31: Approved in the US only (accelerated approval). Research-grade material of either is not a medicine and is supplied for in vitro research only.

Where can I buy MOTS-c and SS-31?

Nordapep lists compounds with a Certificate of Analysis matched to the batch reference. Check each compound page for current availability.

More comparisons

For laboratory research only. Nothing on peptide.wiki is medical advice. The compounds described are not for human or veterinary use, and research-grade material is not a medicine.